Heat Map of the Distances between Graphs — plot_hamming

Returns a heat map of the distance matrix for a particular CVN

Usage

plot_hamming_distances(
  distance_matrix,
  absolute = TRUE,
  limits = c(NA, NA),
  title = "",
  legend_label = "Hamming Distance",
  add_counts_to_cells = TRUE,
  add_ticks_labels = TRUE,
  t = -6,
  r = -8
)

Arguments

distance_matrix: Symmetric matrix with distances
absolute: If FALSE, rescaled to [0,1]
limits: The limits for the values of the Hamming distance
title: Title plot (Default is none)
legend_label: Title of the legend (Default: "Hamming Distance")
add_counts_to_cells: If TRUE, counts from the matrix are added to the plot (Default: TRUE)
add_ticks_labels: If TRUE, the number corresponding to the graph is add to the plot (Default: TRUE)
t: Distance between tick labels and x-axis (Default: -6)
r: Distance between tick labels and y-axis (Default: -8)

Value

A heatmap plot

Examples

         
path <- system.file("cvnfit.RData", package = "CVN")
load(path)
hd <- hamming_distance(fit, verbose = FALSE)

plot_hamming_distances(hd$distance[[1]])